Pei Chen, Rui Liu, Kazuyuki Aihara, Luonan Chen. Autoreservoir computing for multistep ahead prediction based on the spatiotemporal information transformation. Nature Communications, DOI : 10.1038/s41467-020-18381-0, 2020. |
Chen Li, Yi-Di Sun,Guan-Yu Yu, Jing-Ru Cui, Zheng Lou, Hang Zhang, Ya Huang, Chen-Guang Bai, Lu-Lu Deng, Peng Liu, Kuo Zheng, Yan-Hua Wang, Qin-Qin Wang, Qing-Run Li, Qing-Qing Wu, Qi Liu, Yu Shyr, Yi-Xue Li, Luonan Chen, Jia-Rui Wu, Wei Zhang, Rong Zeng. Integrated Omics of Metastatic Colorectal Cancer. Cancer Cell, https://doi.org/10.1016/j.ccell.2020.08.002, 2020.
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Xiaojing Gao, Qingrun Li , Yansheng Liu, Rong Zeng. Multi-in-One: Multiple-Proteases, One-Hour-Shot Strategy for Fast and High-Coverage Phosphoproteomic Investigation.Anal Chem. 92(13):8943-8951. doi: 10.1021/acs.analchem.0c00906. 2020. |
Wangxin Guo, Lin Li, Juan He, Zhuang Liu, Ming Han, Fei Li, Xinyi Xia, Xiaoyu Zhang, Yao Zhu, Yu Wei, Yunguang Li, Rebiguli Aji, Hao Dai Hui Wei, Chunfeng Li, Yu Chen, Luonan Chen, Dong Gao. Single-cell transcriptomics identifies a distinct luminal progenitor cell type in the distal prostate invagination tips. Nature Genetics, Doi: 10.1038/s41588-020-0642-1, 2020. |
Li Feng, Yuan-Yuan Yin, Cong-Hui Liu, Ke-Ren Xu , Qing-Run Li, Jia-Rui Wu, Rong Zeng. Proteome-wide Data Analysis Reveals Tissue-specific Network Associated with SARS-CoV-2 Infection. J Mol Cell Biol, doi: 10.1093/jmcb/mjaa033. 2020 |
Ming-Li Li, Hui Tang, Yong Shao, Ming-Shan Wang, Hai-Bo Xu, Sheng Wang, David M. Irwin, Adeniyi C. Adeola, Tao Zeng, Luonan Chen, Yan Li, Dong-Dong Wu. Evolution and transition of expression trajectory during human brain development. BMC Evolutionary Biology, 20:72, 2020. |
Siyang Leng, Huanfei Ma, J¨urgen Kurths, Ying-Cheng Lai, Wei Lin, Kazuyuki Aihara, and Luonan Chen. Partial cross mapping eliminates indirect causal influences. Nature Communciations, 11:2632,2020. |
Yanhong Huan, Xiao Chang, Yu Zhang, Luonan Chen, Xiaoping Liu. Disease characterization using a partial correlation-based sample-specific network. Briefings in Bioinformatics, DOI: 10.1093/bib/bbaa062, 2020. |
Yichong Wu, Tiejun Li, Xiaoping Liu, Luonan Chen. Differential network inference via the fused D-trace loss with cross variables. Electronic Journal of Statistics, 14:1269–1301, 2020. |
Zhonglin Jiang, Lina Lu, Yuwei Liu, Si Zhang, Shuxian Li, Guanyu Wang, Peng Wang, Luonan Chen. SMAD7 and SERPINE1 as novel dynamic network biomarkers detect and regulate the tipping point of TGF-beta induced EMT. Science Bulletin, DOI:10.1016/j.scib.2020.01.013, 2020. |
Hui Tang, Ying Tang, Tao Zeng, Luonan Chen. Gene expression analysis reveals the tipping points during infant brain development for human and chimpanzee. BMC Genomics, 21:74 2020. |
Chuan Chen, Rui Li, Lin Shu, Zhiyu He, Jining Wang, Chengming Zhang, Huanfei Ma, Kazuyuki Aihara, Luonan Chen. Predicting Future Dynamics from Short-term Time Series by Anticipated Learning Machine. National Science Review, 7: 1079–1091, 2020. |
Deshun Sun, Fei Liu, Sharon E. Mitchell, Huanfei Ma, Davina Derous, Yingchun Wang, Jackie J.D. Han, Daniel E.L. Promislow, David Lusseau, Alex Douglas, John R. Speakman and Luonan Chen. The effects of graded levels of calorie restriction XV: phase space attractors reveal distinct bahavioral phenotypes. Journal of Gerontology: Biological Sciences, 75(5):858-866, 2020. |
Meiyi Li, Zhiyuan Liu, Bangguo Qian, Weixin Liu, Katsuhisa Horimoto, Huarong Zhou, and Luonan Chen. “Dysfunctions” induced by Roux-en-Y gastric bypass surgery are concomitant with metabolic improvement independent of weight loss. Cell Discovery, 6:4, 2020. |
Huahai Qiu, Zhanjiang Yuan, Tianshou Zhou, Luonan Chen. Different effects of fast and slow input fluctuations on output in gene regulation. Chaos, https://doi.org/10.1063/1.5133148, 2020. |
Rui Liu, Pei Chen, Luonan Chen. Single-sample landscape entropy reveals the imminent phase transition during disease progression. Bioinformatics, doi.10.1093/bioinformatics/btz758, 36(5),1522–1532,2020. |