| |
|
Key Laboratory of
Systems Biology,
Shanghai Institutes for
Biological Sciences,
Chinese Academy of Sciences
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
-
MDCinfer
(Inferring
protein-protein interactions based on multi-domain Cooperation)
|
-
TRNInfer
(Inferring transcriptional
regulatory networks from high-throughput data)
|
- MetaILP
(Detecting drug targets in metabolic networks by
integer linear programming)
|
- MILPs
(Identifying differentially expressed pathways via a mixed
integer linear programming model)
|
-
PRNA
(Prediction of protein-RNA binding sites by a random forest method
with combined features)
|
-
SANA (Protein
Structure Alignment by Neighborhood Alignment)
|
-
FPPI
(Fusarium graminearum Protein-Protein Interactions)
|
-
NOA (NOA:
Network Ontology Analysis)
|
-
ModifiedBIRS
(Feature Selection for PDZ domain-Peptide Interaction Prediction).
|
-
MCentridFS (Multi-class Centroid Feature Selection)
|
- PMNminer (Progressive module network analysis)
|
- NetSA(Network Stratification
Analysis)
|
-
CNS (Comparative Network Stratification)
|
-
PFA (Pattern Fusion Analysis)
|
- SSN (Sample-Specific Network)
|
|
|
- LNCA (Local network component analysis)
|
- SCS (Single-sample Controller Strategy)
|
|
|
- CCSN (Conditional Cell-Specific Network)
|